HL_8UTI_020
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- ACGUGCAAAU
- Length
- 10 nucleotides
- Bulged bases
- 8UTI|1|A|U|879, 8UTI|1|A|A|883, 8UTI|1|A|A|884
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UTI_020 not in the Motif Atlas
- Homologous match to HL_8C3A_020
- Geometric discrepancy: 0.076
- The information below is about HL_8C3A_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39334.8
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
8UTI|1|A|A|876
8UTI|1|A|C|877
8UTI|1|A|G|878
8UTI|1|A|U|879
8UTI|1|A|G|880
8UTI|1|A|C|881
8UTI|1|A|A|882
8UTI|1|A|A|883
8UTI|1|A|A|884
8UTI|1|A|U|885
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L3
- Chain LR
- 60S ribosomal protein L17-A
- Chain Ll
- 60S ribosomal protein L37-A
- Chain z
- Cytoplasmic 60S subunit biogenesis factor REH1 (N-terminal 3xFLAG tag)
Coloring options: