HL_8UU5_029
3D structure
- PDB id
- 8UU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAGUGCGUAAUAGCUC
- Length
- 16 nucleotides
- Bulged bases
- 8UU5|1|A|A|1134
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU5_029 not in the Motif Atlas
- Geometric match to HL_5J7L_162
- Geometric discrepancy: 0.2708
- The information below is about HL_5J7L_162
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_04775.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
8UU5|1|A|G|1133
8UU5|1|A|A|1134
8UU5|1|A|G|1135
8UU5|1|A|U|1136
8UU5|1|A|G|1137
8UU5|1|A|C|1138
8UU5|1|A|G|1139
8UU5|1|A|U|1140
8UU5|1|A|A|1141
8UU5|1|A|A|1142
8UU5|1|A|U|1143
8UU5|1|A|A|1144
8UU5|1|A|G|1145
8UU5|1|A|C|1146
8UU5|1|A|U|1147
8UU5|1|A|C|1148
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 8
- Large ribosomal subunit protein bL36
- Chain G
- Large ribosomal subunit protein uL6
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