HL_8UU8_102
3D structure
- PDB id
- 8UU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAGGGUAG
- Length
- 8 nucleotides
- Bulged bases
- 8UU8|1|x|G|18, 8UU8|1|x|G|19, 8UU8|1|x|U|20
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU8_102 not in the Motif Atlas
- Homologous match to HL_6PMO_003
- Geometric discrepancy: 0.1764
- The information below is about HL_6PMO_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UU8|1|x|C|13
8UU8|1|x|A|14
8UU8|1|x|G|15
8UU8|1|x|G|18
8UU8|1|x|G|19
8UU8|1|x|U|20
8UU8|1|x|A|21
8UU8|1|x|G|22
Current chains
- Chain x
- pe/E Hybrid State Phenylalanine tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: