HL_8VFT_024
3D structure
- PDB id
- 8VFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translating 80S rabbit ribosome stalled by emetine with eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- ACGUGCGAAU
- Length
- 10 nucleotides
- Bulged bases
- 8VFT|1|5|U|1596, 8VFT|1|5|A|1600, 8VFT|1|5|A|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VFT_024 not in the Motif Atlas
- Homologous match to HL_8P9A_132
- Geometric discrepancy: 0.124
- The information below is about HL_8P9A_132
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
8VFT|1|5|A|1593
8VFT|1|5|C|1594
8VFT|1|5|G|1595
8VFT|1|5|U|1596
8VFT|1|5|G|1597
8VFT|1|5|C|1598
8VFT|1|5|G|1599
8VFT|1|5|A|1600
8VFT|1|5|A|1601
8VFT|1|5|U|1602
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain B
- uL3
- Chain C
- uL4
- Chain P
- uL22
- Chain j
- eL37
Coloring options: