HL_8VK7_045

3D structure

PDB id

8VK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UUUA

Length

4 nucleotides

Bulged bases

8VK7|1|A|U|1946, 8VK7|1|A|U|1947

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8VK7_045 not in the Motif Atlas

Geometric match to HL_5J7L_176

Geometric discrepancy: 0.36

The information below is about HL_5J7L_176

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.4

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

8VK7|1|A|U|1945
8VK7|1|A|U|1946
8VK7|1|A|U|1947
8VK7|1|A|A|1948

Current chains

Chain A

23S ribosomal RNA

Nearby chains