HL_8VTY_120
3D structure
- PDB id
- 8VTY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ciprofloxacin and protein Y at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- UAUUGAAGCA
- Length
- 10 nucleotides
- Bulged bases
- 8VTY|1|2A|C|574
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VTY_120 not in the Motif Atlas
- Geometric match to HL_7RQB_018
- Geometric discrepancy: 0.0433
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
8VTY|1|2A|U|566
8VTY|1|2A|A|567
8VTY|1|2A|U|568
8VTY|1|2A|U|569
8VTY|1|2A|G|570
8VTY|1|2A|A|571
8VTY|1|2A|A|572
8VTY|1|2A|G|573
8VTY|1|2A|C|574
8VTY|1|2A|A|575
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 25
- 50S ribosomal protein L32
- Chain 2E
- 50S ribosomal protein L3
- Chain 2P
- 50S ribosomal protein L15
- Chain 2V
- 50S ribosomal protein L21
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