HL_8VVQ_072
3D structure
- PDB id
- 8VVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUCAGUACG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VVQ_072 not in the Motif Atlas
- Geometric match to HL_8CRE_057
- Geometric discrepancy: 0.2057
- The information below is about HL_8CRE_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80599.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8VVQ|1|WA|U|4303
8VVQ|1|WA|U|4304
8VVQ|1|WA|C|4305
8VVQ|1|WA|A|4306
8VVQ|1|WA|G|4307
8VVQ|1|WA|U|4308
8VVQ|1|WA|A|4309
8VVQ|1|WA|C|4310
8VVQ|1|WA|G|4311
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain NA
- eL42
- Chain P
- eL18
- Chain S
- eL21
- Chain Z
- L27A
Coloring options: