HL_8VVT_036
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUUCAGAUCC
- Length
- 10 nucleotides
- Bulged bases
- 8VVT|1|WA|U|2535, 8VVT|1|WA|C|2536
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VVT_036 not in the Motif Atlas
- Geometric match to HL_8CRE_034
- Geometric discrepancy: 0.1161
- The information below is about HL_8CRE_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81545.2
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8VVT|1|WA|G|2528
8VVT|1|WA|U|2529
8VVT|1|WA|U|2530
8VVT|1|WA|C|2531
8VVT|1|WA|A|2532
8VVT|1|WA|G|2533
8VVT|1|WA|A|2534
8VVT|1|WA|U|2535
8VVT|1|WA|C|2536
8VVT|1|WA|C|2537
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain FA
- eL34
- Chain Q
- eL19
- Chain W
- uL23
- Chain b
- Proliferation-associated protein 2G4
Coloring options: