HL_8VVT_043
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGCAGCAG
- Length
- 8 nucleotides
- Bulged bases
- 8VVT|1|WA|C|2799, 8VVT|1|WA|G|2801, 8VVT|1|WA|A|2803
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VVT_043 not in the Motif Atlas
- Geometric match to HL_8P9A_152
- Geometric discrepancy: 0.0723
- The information below is about HL_8P9A_152
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28592.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
8VVT|1|WA|C|2797
8VVT|1|WA|G|2798
8VVT|1|WA|C|2799
8VVT|1|WA|A|2800
8VVT|1|WA|G|2801
8VVT|1|WA|C|2802
8VVT|1|WA|A|2803
8VVT|1|WA|G|2804
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain C
- uL4
- Chain IA
- L37
- Chain KA
- eL39
- Chain O
- uL22
Coloring options: