HL_8VVU_018
3D structure
- PDB id
- 8VVU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GGUAAACUCC
- Length
- 10 nucleotides
- Bulged bases
- 8VVU|1|WA|G|315, 8VVU|1|WA|U|316
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VVU_018 not in the Motif Atlas
- Geometric match to HL_8CRE_009
- Geometric discrepancy: 0.181
- The information below is about HL_8CRE_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77600.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8VVU|1|WA|G|314
8VVU|1|WA|G|315
8VVU|1|WA|U|316
8VVU|1|WA|A|317
8VVU|1|WA|A|318
8VVU|1|WA|A|319
8VVU|1|WA|C|320
8VVU|1|WA|U|321
8VVU|1|WA|C|322
8VVU|1|WA|C|323
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain HA
- L36
- Chain K
- eL13
- Chain M
- L15
- Chain NA
- eL42
- Chain Z
- L27A
Coloring options: