HL_8WIB_076
3D structure
- PDB id
- 8WIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WIB_076 not in the Motif Atlas
- Homologous match to HL_6UFM_002
- Geometric discrepancy: 0.2479
- The information below is about HL_6UFM_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 42
Unit IDs
8WIB|1|C|G|31
8WIB|1|C|C|32
8WIB|1|C|U|33
8WIB|1|C|C|34
8WIB|1|C|A|35
8WIB|1|C|U|36
8WIB|1|C|A|37
8WIB|1|C|A|38
8WIB|1|C|C|39
Current chains
- Chain C
- E-tRNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain h
- 30S ribosomal protein S7
- Chain l
- 30S ribosomal protein S11
- Chain w
- Ribosome hibernation promotion factor RafH
Coloring options: