HL_8WIC_069
3D structure
- PDB id
- 8WIC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E- tRNA and RafH.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 8WIC|1|A|G|2975
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WIC_069 not in the Motif Atlas
- Homologous match to HL_7RQB_066
- Geometric discrepancy: 0.1278
- The information below is about HL_7RQB_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56677.7
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 8
Unit IDs
8WIC|1|A|C|2969
8WIC|1|A|U|2970
8WIC|1|A|G|2971
8WIC|1|A|A|2972
8WIC|1|A|A|2973
8WIC|1|A|A|2974
8WIC|1|A|G|2975
8WIC|1|A|C|2976
8WIC|1|A|A|2977
8WIC|1|A|U|2978
8WIC|1|A|C|2979
8WIC|1|A|U|2980
8WIC|1|A|A|2981
8WIC|1|A|A|2982
8WIC|1|A|G|2983
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain I
- 50S ribosomal protein L6
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