HL_8WRC_017

3D structure

PDB id

8WRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-Resolved Ambient Temperature Kineto-Crystallographic Structure of Initiation Factor in Complex with Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.59 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

8WRC|1|A|U|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8WRC_017 not in the Motif Atlas

Homologous match to HL_4LFB_017

Geometric discrepancy: 0.1398

The information below is about HL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

8WRC|1|A|G|786
8WRC|1|A|A|787
8WRC|1|A|U|788
8WRC|1|A|U|789
8WRC|1|A|A|790
8WRC|1|A|G|791
8WRC|1|A|A|792
8WRC|1|A|U|793
8WRC|1|A|A|794
8WRC|1|A|C|795
8WRC|1|A|C|796

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11