HL_8WV1_001
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- UGGCUACCUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WV1_001 not in the Motif Atlas
- Homologous match to HL_9DFE_001
- Geometric discrepancy: 0.1602
- The information below is about HL_9DFE_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_17803.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8WV1|1|A|U|58
8WV1|1|A|G|59
8WV1|1|A|G|60
8WV1|1|A|C|61
8WV1|1|A|U|62
8WV1|1|A|A|63
8WV1|1|A|C|64
8WV1|1|A|C|65
8WV1|1|A|U|66
8WV1|1|A|G|67
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain S
- 50S ribosomal protein L23
- Chain X
- Large ribosomal subunit protein uL29
Coloring options: