HL_8WV1_019
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- GGAUGCAAAC
- Length
- 10 nucleotides
- Bulged bases
- 8WV1|1|A|U|794, 8WV1|1|A|A|798, 8WV1|1|A|A|799
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WV1_019 not in the Motif Atlas
- Homologous match to HL_9DFE_021
- Geometric discrepancy: 0.1933
- The information below is about HL_9DFE_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 12
Unit IDs
8WV1|1|A|G|791
8WV1|1|A|G|792
8WV1|1|A|A|793
8WV1|1|A|U|794
8WV1|1|A|G|795
8WV1|1|A|C|796
8WV1|1|A|A|797
8WV1|1|A|A|798
8WV1|1|A|A|799
8WV1|1|A|C|800
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain 2
- 50S ribosomal protein L34
- Chain D
- 50S ribosomal protein L3
- Chain E
- 50S ribosomal protein L4
- Chain R
- 50S ribosomal protein L22
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