HL_8WV1_041
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- UUUACCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 8WV1|1|A|A|1811, 8WV1|1|A|C|1812, 8WV1|1|A|C|1813, 8WV1|1|A|A|1817
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WV1_041 not in the Motif Atlas
- Homologous match to HL_5J7L_178
- Geometric discrepancy: 0.1732
- The information below is about HL_5J7L_178
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
8WV1|1|A|U|1808
8WV1|1|A|U|1809
8WV1|1|A|U|1810
8WV1|1|A|A|1811
8WV1|1|A|C|1812
8WV1|1|A|C|1813
8WV1|1|A|A|1814
8WV1|1|A|A|1815
8WV1|1|A|A|1816
8WV1|1|A|A|1817
8WV1|1|A|A|1818
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain C
- 50S ribosomal protein L2
- Chain R
- 50S ribosomal protein L22
Coloring options: