HL_8WV1_045
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- UCGGGUAAGUUCCGA
- Length
- 15 nucleotides
- Bulged bases
- 8WV1|1|A|U|1977
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WV1_045 not in the Motif Atlas
- Geometric match to HL_5TBW_226
- Geometric discrepancy: 0.3616
- The information below is about HL_5TBW_226
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59342.2
- Basepair signature
- cWW-F-F-F-F-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
8WV1|1|A|U|1968
8WV1|1|A|C|1969
8WV1|1|A|G|1970
8WV1|1|A|G|1971
8WV1|1|A|G|1972
8WV1|1|A|U|1973
8WV1|1|A|A|1974
8WV1|1|A|A|1975
8WV1|1|A|G|1976
8WV1|1|A|U|1977
8WV1|1|A|U|1978
8WV1|1|A|C|1979
8WV1|1|A|C|1980
8WV1|1|A|G|1981
8WV1|1|A|A|1982
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain J
- Large ribosomal subunit protein uL14
Coloring options: