HL_8WV1_064
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- CAUUCCG
- Length
- 7 nucleotides
- Bulged bases
- 8WV1|1|B|U|41
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WV1_064 not in the Motif Atlas
- Homologous match to HL_4V9F_071
- Geometric discrepancy: 0.1885
- The information below is about HL_4V9F_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59381.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8WV1|1|B|C|38
8WV1|1|B|A|39
8WV1|1|B|U|40
8WV1|1|B|U|41
8WV1|1|B|C|42
8WV1|1|B|C|43
8WV1|1|B|G|44
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain N
- 50S ribosomal protein L18
- Chain Z
- 50S ribosomal protein L31
Coloring options: