HL_8WV1_136
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 8WV1|1|A|A|2052, 8WV1|1|A|A|2053, 8WV1|1|A|G|2054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WV1_136 not in the Motif Atlas
- Homologous match to HL_9DFE_048
- Geometric discrepancy: 0.2575
- The information below is about HL_9DFE_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8WV1|1|A|G|2049
8WV1|1|A|U|2050
8WV1|1|A|G|2051
8WV1|1|A|A|2052
8WV1|1|A|A|2053
8WV1|1|A|G|2054
8WV1|1|A|A|2055
8WV1|1|A|U|2056
8WV1|1|A|G|2057
8WV1|1|A|C|2058
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain D
- 50S ribosomal protein L3
- Chain P
- 50S ribosomal protein L20
- Chain Q
- 50S ribosomal protein L21
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