HL_8WV1_141
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- GUUCGUGGAGC
- Length
- 11 nucleotides
- Bulged bases
- 8WV1|1|a|G|413
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WV1_141 not in the Motif Atlas
- Homologous match to HL_9DFE_012
- Geometric discrepancy: 0.2441
- The information below is about HL_9DFE_012
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.8
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8WV1|1|a|G|409
8WV1|1|a|U|410
8WV1|1|a|U|411
8WV1|1|a|C|412
8WV1|1|a|G|413
8WV1|1|a|U|414
8WV1|1|a|G|415
8WV1|1|a|G|416
8WV1|1|a|A|417
8WV1|1|a|G|418
8WV1|1|a|C|419
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 8
- 50S ribosomal protein L35
- Chain k
- 50S ribosomal protein L15
- Chain w
- Large ribosomal subunit protein bL28
Coloring options: