HL_8WV1_147
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- CUAAAAGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 8WV1|1|a|A|2280, 8WV1|1|a|C|2287
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WV1_147 not in the Motif Atlas
- Homologous match to HL_9DFE_052
- Geometric discrepancy: 0.166
- The information below is about HL_9DFE_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8WV1|1|a|C|2276
8WV1|1|a|U|2277
8WV1|1|a|A|2278
8WV1|1|a|A|2279
8WV1|1|a|A|2280
8WV1|1|a|A|2281
8WV1|1|a|G|2282
8WV1|1|a|G|2283
8WV1|1|a|U|2284
8WV1|1|a|A|2285
8WV1|1|a|A|2286
8WV1|1|a|C|2287
8WV1|1|a|G|2288
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain l
- 50S ribosomal protein L16
- Chain u
- 50S ribosomal protein L25
- Chain v
- Large ribosomal subunit protein bL27
Coloring options: