HL_8XZ3_019
3D structure
- PDB id
- 8XZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycobacterium smegmatis 50S ribosomal subunit with Erythromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUUUGAAGAA
- Length
- 10 nucleotides
- Bulged bases
- 8XZ3|1|A|A|666
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8XZ3_019 not in the Motif Atlas
- Geometric match to HL_7RQB_018
- Geometric discrepancy: 0.1504
- The information below is about HL_7RQB_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_41998.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 69
Unit IDs
8XZ3|1|A|U|658
8XZ3|1|A|U|659
8XZ3|1|A|U|660
8XZ3|1|A|U|661
8XZ3|1|A|G|662
8XZ3|1|A|A|663
8XZ3|1|A|A|664
8XZ3|1|A|G|665
8XZ3|1|A|A|666
8XZ3|1|A|A|667
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein bL37
- Chain D
- Large ribosomal subunit protein uL3
- Chain M
- Large ribosomal subunit protein uL15
- Chain R
- Large ribosomal subunit protein bL20
- Chain S
- Large ribosomal subunit protein bL21
- Chain b
- Large ribosomal subunit protein bL32
Coloring options: