HL_8Y0U_093
3D structure
- PDB id
- 8Y0U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- dormant ribosome with STM1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Y0U_093 not in the Motif Atlas
- Homologous match to HL_8C3A_211
- Geometric discrepancy: 0.1531
- The information below is about HL_8C3A_211
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8Y0U|1|C2|A|900
8Y0U|1|C2|G|901
8Y0U|1|C2|G|902
8Y0U|1|C2|U|903
8Y0U|1|C2|G|904
8Y0U|1|C2|A|905
8Y0U|1|C2|A|906
8Y0U|1|C2|A|907
8Y0U|1|C2|U|908
8Y0U|1|C2|U|909
Current chains
- Chain C2
- 18S rRNA
Nearby chains
- Chain SB
- 40S ribosomal protein S1-A
- Chain SO
- Small ribosomal subunit protein uS11B
- Chain Sa
- Small ribosomal subunit protein eS26B
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