HL_8Y0U_102

3D structure

PDB id

8Y0U (explore in PDB, NAKB, or RNA 3D Hub)

Description

dormant ribosome with STM1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

8Y0U|1|C2|U|1314

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8Y0U_102 not in the Motif Atlas

Homologous match to HL_4V88_215

Geometric discrepancy: 0.1875

The information below is about HL_4V88_215

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

8Y0U|1|C2|C|1309
8Y0U|1|C2|U|1310
8Y0U|1|C2|U|1311
8Y0U|1|C2|A|1312
8Y0U|1|C2|A|1313
8Y0U|1|C2|U|1314
8Y0U|1|C2|U|1315
8Y0U|1|C2|G|1316

Current chains

Chain C2

18S rRNA

Nearby chains