HL_8ZEJ_005

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8ZEJ|1|A|U|209, 8ZEJ|1|A|C|210

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZEJ_005 not in the Motif Atlas

Geometric match to HL_9D9P_003

Geometric discrepancy: 0.3989

The information below is about HL_9D9P_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

8ZEJ|1|A|C|207
8ZEJ|1|A|U|208
8ZEJ|1|A|U|209
8ZEJ|1|A|C|210
8ZEJ|1|A|G|211
8ZEJ|1|A|G|212

Current chains

Chain A

16S rRNA

Nearby chains