HL_8ZEJ_010

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZEJ_010 not in the Motif Atlas

Geometric match to HL_4LFB_028

Geometric discrepancy: 0.2517

The information below is about HL_4LFB_028

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

8ZEJ|1|A|C|379
8ZEJ|1|A|G|380
8ZEJ|1|A|C|381
8ZEJ|1|A|A|382
8ZEJ|1|A|A|383
8ZEJ|1|A|G|384

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16