HL_8ZEJ_032

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8ZEJ|1|A|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZEJ_032 not in the Motif Atlas

Geometric match to HL_6QN3_003

Geometric discrepancy: 0.176

The information below is about HL_6QN3_003

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

8ZEJ|1|A|C|1449
8ZEJ|1|A|U|1450
8ZEJ|1|A|U|1451
8ZEJ|1|A|C|1452
8ZEJ|1|A|G|1453
8ZEJ|1|A|G|1454

Current chains

Chain A

16S rRNA

Nearby chains