HL_8ZFI_091
3D structure
- PDB id
- 8ZFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 8ZFI|1|b|A|1913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZFI_091 not in the Motif Atlas
- Geometric match to HL_8CRE_047
- Geometric discrepancy: 0.1401
- The information below is about HL_8CRE_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8ZFI|1|b|G|1910
8ZFI|1|b|U|1911
8ZFI|1|b|A|1912
8ZFI|1|b|A|1913
8ZFI|1|b|C|1914
8ZFI|1|b|U|1915
8ZFI|1|b|A|1916
8ZFI|1|b|U|1917
8ZFI|1|b|A|1918
8ZFI|1|b|A|1919
8ZFI|1|b|C|1920
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain Y
- Transfer RNA; tRNA
- Chain Z
- Transfer RNA; tRNA
Coloring options: