HL_8ZH3_057
3D structure
- PDB id
- 8ZH3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/P-P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUCAGUGUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZH3_057 not in the Motif Atlas
- Homologous match to HL_8CRE_057
- Geometric discrepancy: 0.0592
- The information below is about HL_8CRE_057
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80599.2
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8ZH3|1|LA|U|2724
8ZH3|1|LA|U|2725
8ZH3|1|LA|C|2726
8ZH3|1|LA|A|2727
8ZH3|1|LA|G|2728
8ZH3|1|LA|U|2729
8ZH3|1|LA|G|2730
8ZH3|1|LA|U|2731
8ZH3|1|LA|G|2732
Current chains
- Chain LA
- 25S rRNA (3393-MER)
Nearby chains
- Chain LS
- Large ribosomal subunit protein eL18A
- Chain LV
- Large ribosomal subunit protein eL21A
- Chain Lc
- Large ribosomal subunit protein uL15
- Chain Lq
- Large ribosomal subunit protein eL42A
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