HL_8ZH3_061
3D structure
- PDB id
- 8ZH3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/P-P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- AGCAGAAU
- Length
- 8 nucleotides
- Bulged bases
- 8ZH3|1|LA|G|2898
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZH3_061 not in the Motif Atlas
- Homologous match to HL_8P9A_173
- Geometric discrepancy: 0.0873
- The information below is about HL_8P9A_173
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_46665.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
8ZH3|1|LA|A|2897
8ZH3|1|LA|G|2898
8ZH3|1|LA|C|2899
8ZH3|1|LA|A|2900
8ZH3|1|LA|G|2901
8ZH3|1|LA|A|2902
8ZH3|1|LA|A|2903
8ZH3|1|LA|U|2904
Current chains
- Chain LA
- 25S rRNA (3393-MER)
Nearby chains
- Chain LK
- Large ribosomal subunit protein uL6A
- Chain Lo
- Large ribosomal subunit protein eL40A
Coloring options: