HL_9AXU_032

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

9AXU|1|2|U|1641, 9AXU|1|2|U|1642

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

14

Unit IDs

9AXU|1|2|G|1634
9AXU|1|2|U|1635
9AXU|1|2|U|1636
9AXU|1|2|A|1637
9AXU|1|2|A|1638
9AXU|1|2|U|1639
9AXU|1|2|A|1640
9AXU|1|2|U|1641
9AXU|1|2|U|1642
9AXU|1|2|C|1643

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain d

Large ribosomal subunit protein eL19B

Chain j

Large ribosomal subunit protein uL23A

Chain s

Large ribosomal subunit protein eL34B

Chain x

Large ribosomal subunit protein eL39