HL_9AXU_064

3D structure

PDB id

9AXU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-translating S. pombe ribosome large subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.94 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

9AXU|1|2|U|3292, 9AXU|1|2|U|3293

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9AXU_064 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3428

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

9AXU|1|2|C|3291
9AXU|1|2|U|3292
9AXU|1|2|U|3293
9AXU|1|2|G|3294

Current chains

Chain 2

28S ribosomal RNA

Nearby chains

Chain U

Large ribosomal subunit protein uL6B