HL_9AXU_072
3D structure
- PDB id
- 9AXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Non-translating S. pombe ribosome large subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.94 Å
Loop
- Sequence
- UGAAUUGCAGAAUUCCGUGAA
- Length
- 21 nucleotides
- Bulged bases
- 9AXU|1|4|U|89, 9AXU|1|4|U|90, 9AXU|1|4|C|92, 9AXU|1|4|U|94
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68571.1
- Basepair signature
- cWW-tSH-tHS-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9AXU|1|4|U|77
9AXU|1|4|G|78
9AXU|1|4|A|79
9AXU|1|4|A|80
9AXU|1|4|U|81
9AXU|1|4|U|82
9AXU|1|4|G|83
9AXU|1|4|C|84
9AXU|1|4|A|85
9AXU|1|4|G|86
9AXU|1|4|A|87
9AXU|1|4|A|88
9AXU|1|4|U|89
9AXU|1|4|U|90
9AXU|1|4|C|91
9AXU|1|4|C|92
9AXU|1|4|G|93
9AXU|1|4|U|94
9AXU|1|4|G|95
9AXU|1|4|A|96
9AXU|1|4|A|97
Current chains
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- Large ribosomal subunit protein uL24
- Chain t
- Large ribosomal subunit protein uL29
- Chain x
- Large ribosomal subunit protein eL39
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