HL_9AZN_090
3D structure
- PDB id
- 9AZN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A/P-P/E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- ACUUUUAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9AZN_090 not in the Motif Atlas
- Homologous match to HL_5UD5_002
- Geometric discrepancy: 0.3661
- The information below is about HL_5UD5_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_68642.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
9AZN|1|PE|A|31
9AZN|1|PE|C|32
9AZN|1|PE|U|33
9AZN|1|PE|U|34
9AZN|1|PE|U|35
9AZN|1|PE|U|36
9AZN|1|PE|A|37
9AZN|1|PE|A|38
9AZN|1|PE|U|39
Current chains
- Chain PE
- P/E site tRNA
Nearby chains
- Chain S3
- Small subunit ribosomal RNA; SSU rRNA
- Chain SP
- Small ribosomal subunit protein uS19
- Chain SQ
- Small ribosomal subunit protein uS9
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