HL_9AZN_093
3D structure
- PDB id
- 9AZN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human A/P-P/E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- GUUGAUCCUGC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9AZN_093 not in the Motif Atlas
- Homologous match to HL_8CRE_191
- Geometric discrepancy: 0.0793
- The information below is about HL_8CRE_191
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_73535.1
- Basepair signature
- cWW-tHW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9AZN|1|S3|G|7
9AZN|1|S3|U|8
9AZN|1|S3|U|9
9AZN|1|S3|G|10
9AZN|1|S3|A|11
9AZN|1|S3|U|12
9AZN|1|S3|C|13
9AZN|1|S3|C|14
9AZN|1|S3|U|15
9AZN|1|S3|G|16
9AZN|1|S3|C|17
Current chains
- Chain S3
- 18S rRNA
Nearby chains
- Chain SC
- 40S ribosomal protein S2
- Chain SX
- 40S ribosomal protein S23
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