HL_9B0N_056
3D structure
- PDB id
- 9B0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human Post-eEF1A-AT-P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.92 Å
Loop
- Sequence
- GUAACUAUGAC
- Length
- 11 nucleotides
- Bulged bases
- 9B0N|1|L5|A|3760
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B0N_056 not in the Motif Atlas
- Homologous match to HL_8CRE_047
- Geometric discrepancy: 0.3633
- The information below is about HL_8CRE_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9B0N|1|L5|G|3757
9B0N|1|L5|U|3758
9B0N|1|L5|A|3759
9B0N|1|L5|A|3760
9B0N|1|L5|C|3761
9B0N|1|L5|U|3762
9B0N|1|L5|A|3763
9B0N|1|L5|U|3764
9B0N|1|L5|G|3765
9B0N|1|L5|A|3766
9B0N|1|L5|C|3767
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain AT
- Transfer RNA; tRNA
- Chain Pt
- Transfer RNA; tRNA
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
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