HL_9B24_023
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GGCAGAGAUGUC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B24_023 not in the Motif Atlas
- Homologous match to HL_5J7L_216
- Geometric discrepancy: 0.5293
- The information below is about HL_5J7L_216
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78284.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9B24|1|A|G|992
9B24|1|A|G|993
9B24|1|A|C|994
9B24|1|A|A|995
9B24|1|A|G|996
9B24|1|A|A|997
9B24|1|A|G|998
9B24|1|A|A|999
9B24|1|A|U|1000
9B24|1|A|G|1001
9B24|1|A|U|1002
9B24|1|A|C|1003
Current chains
- Chain A
- RNA (1528-MER)
Nearby chains
- Chain N
- Small ribosomal subunit protein uS14B
Coloring options: