HL_9B24_048
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- GGCCCGUGGAAUC
- Length
- 13 nucleotides
- Bulged bases
- 9B24|1|Y|G|474
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B24_048 not in the Motif Atlas
- Homologous match to HL_4WF9_013
- Geometric discrepancy: 0.3192
- The information below is about HL_4WF9_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69139.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9B24|1|Y|G|469
9B24|1|Y|G|470
9B24|1|Y|C|471
9B24|1|Y|C|472
9B24|1|Y|C|473
9B24|1|Y|G|474
9B24|1|Y|U|475
9B24|1|Y|G|476
9B24|1|Y|G|477
9B24|1|Y|A|478
9B24|1|Y|A|479
9B24|1|Y|U|480
9B24|1|Y|C|481
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain t
- Large ribosomal subunit protein bL28
Coloring options: