HL_9B24_089
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- CUAAAAUGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 9B24|1|Y|A|2492, 9B24|1|Y|C|2499
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B24_089 not in the Motif Atlas
- Homologous match to HL_5J7L_187
- Geometric discrepancy: 0.1354
- The information below is about HL_5J7L_187
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91939.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
9B24|1|Y|C|2488
9B24|1|Y|U|2489
9B24|1|Y|A|2490
9B24|1|Y|A|2491
9B24|1|Y|A|2492
9B24|1|Y|A|2493
9B24|1|Y|U|2494
9B24|1|Y|G|2495
9B24|1|Y|U|2496
9B24|1|Y|A|2497
9B24|1|Y|A|2498
9B24|1|Y|C|2499
9B24|1|Y|G|2500
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain i
- Large ribosomal subunit protein uL16
- Chain s
- Large ribosomal subunit protein bL27
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