HL_9B50_068
3D structure
- PDB id
- 9B50 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GCAAAUC
- Length
- 7 nucleotides
- Bulged bases
- 9B50|1|BA|C|1493, 9B50|1|BA|U|1497
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B50_068 not in the Motif Atlas
- Geometric match to HL_8B0X_065
- Geometric discrepancy: 0.1115
- The information below is about HL_8B0X_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_49081.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
9B50|1|BA|G|1492
9B50|1|BA|C|1493
9B50|1|BA|A|1494
9B50|1|BA|A|1495
9B50|1|BA|A|1496
9B50|1|BA|U|1497
9B50|1|BA|C|1498
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BC
- 50S ribosomal protein L2
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