HL_9BH5_084
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- AUACAAAUGAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9BH5_084 not in the Motif Atlas
- Geometric match to HL_4UYK_001
- Geometric discrepancy: 0.3304
- The information below is about HL_4UYK_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
9BH5|1|B2|A|497
9BH5|1|B2|U|498
9BH5|1|B2|A|499
9BH5|1|B2|C|500
9BH5|1|B2|A|501
9BH5|1|B2|A|502
9BH5|1|B2|A|503
9BH5|1|B2|U|504
9BH5|1|B2|G|505
9BH5|1|B2|A|506
9BH5|1|B2|U|507
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AJ
- Small ribosomal subunit protein uS4
- Chain AY
- Small ribosomal subunit protein eS24
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