HL_9BH5_101
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- GUCAUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 9BH5|1|B2|G|1557
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9BH5_101 not in the Motif Atlas
- Homologous match to HL_8C3A_225
- Geometric discrepancy: 0.0996
- The information below is about HL_8C3A_225
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01609.2
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
9BH5|1|B2|G|1550
9BH5|1|B2|U|1551
9BH5|1|B2|C|1552
9BH5|1|B2|A|1553
9BH5|1|B2|U|1554
9BH5|1|B2|C|1555
9BH5|1|B2|A|1556
9BH5|1|B2|G|1557
9BH5|1|B2|C|1558
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AQ
- Small ribosomal subunit protein uS9
- Chain AT
- Small ribosomal subunit protein eS19
- Chain AU
- Small ribosomal subunit protein uS10
- Chain Ad
- Small ribosomal subunit protein uS14
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