HL_9C3H_041
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- CGCAGCAG
- Length
- 8 nucleotides
- Bulged bases
- 9C3H|1|L5|C|2794, 9C3H|1|L5|G|2796, 9C3H|1|L5|A|2798
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9C3H_041 not in the Motif Atlas
- Homologous match to HL_8P9A_152
- Geometric discrepancy: 0.0851
- The information below is about HL_8P9A_152
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28592.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9C3H|1|L5|C|2792
9C3H|1|L5|G|2793
9C3H|1|L5|C|2794
9C3H|1|L5|A|2795
9C3H|1|L5|G|2796
9C3H|1|L5|C|2797
9C3H|1|L5|A|2798
9C3H|1|L5|G|2799
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LC
- Large ribosomal subunit protein uL4
- Chain LP
- Large ribosomal subunit protein eL37
- Chain LU
- Large ribosomal subunit protein eL39
- Chain Lh
- Large ribosomal subunit protein uL22
- Chain NC
- Nascent chain
Coloring options: