HL_9C3H_084
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- ACU(PSU)UAA(A2M)UCCUU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU, A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9C3H_084 not in the Motif Atlas
- Homologous match to HL_8P9A_203
- Geometric discrepancy: 0.1326
- The information below is about HL_8P9A_203
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68749.1
- Basepair signature
- cWW-cWW-F-F-tSH-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9C3H|1|S2|A|569
9C3H|1|S2|C|570
9C3H|1|S2|U|571
9C3H|1|S2|PSU|572
9C3H|1|S2|U|573
9C3H|1|S2|A|574
9C3H|1|S2|A|575
9C3H|1|S2|A2M|576
9C3H|1|S2|U|577
9C3H|1|S2|C|578
9C3H|1|S2|C|579
9C3H|1|S2|U|580
9C3H|1|S2|U|581
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SJ
- Small ribosomal subunit protein uS4
- Chain SY
- Isoform 3 of Small ribosomal subunit protein eS24
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