HL_9E0N_059

3D structure

PDB id

9E0N (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis unmethylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

AGUCCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9E0N_059 not in the Motif Atlas

Geometric match to HL_4WF9_056

Geometric discrepancy: 0.2292

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

9E0N|1|A|A|2695
9E0N|1|A|G|2696
9E0N|1|A|U|2697
9E0N|1|A|C|2698
9E0N|1|A|C|2699
9E0N|1|A|A|2700
9E0N|1|A|U|2701
9E0N|1|A|A|2702
9E0N|1|A|U|2703

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L36

Chain G

Large ribosomal subunit protein uL6

Chain N

Large ribosomal subunit protein uL16