HL_9E0N_076
3D structure
- PDB id
- 9E0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis unmethylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- GGUGAUGGC
- Length
- 9 nucleotides
- Bulged bases
- 9E0N|1|a|G|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0N_076 not in the Motif Atlas
- Geometric match to HL_4LFB_006
- Geometric discrepancy: 0.2329
- The information below is about HL_4LFB_006
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_36455.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9E0N|1|a|G|259
9E0N|1|a|G|260
9E0N|1|a|U|261
9E0N|1|a|G|262
9E0N|1|a|A|263
9E0N|1|a|U|264
9E0N|1|a|G|265
9E0N|1|a|G|266
9E0N|1|a|C|267
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain q
- Small ribosomal subunit protein uS17
- Chain t
- Small ribosomal subunit protein bS20
Coloring options: