HL_9E0N_087
3D structure
- PDB id
- 9E0N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis unmethylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.24 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9E0N|1|a|U|773
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0N_087 not in the Motif Atlas
- Geometric match to HL_8CRE_212
- Geometric discrepancy: 0.231
- The information below is about HL_8CRE_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9E0N|1|a|G|766
9E0N|1|a|A|767
9E0N|1|a|U|768
9E0N|1|a|U|769
9E0N|1|a|A|770
9E0N|1|a|G|771
9E0N|1|a|A|772
9E0N|1|a|U|773
9E0N|1|a|A|774
9E0N|1|a|C|775
9E0N|1|a|C|776
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain g
- Small ribosomal subunit protein uS7
- Chain k
- Small ribosomal subunit protein uS11
Coloring options: