HL_9E0P_007

3D structure

PDB id

9E0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis methylated 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.17 Å

Loop

Sequence

CAAAAUG

Length

7 nucleotides

Bulged bases

9E0P|1|A|U|229

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9E0P_007 not in the Motif Atlas

Geometric match to HL_5J7L_140

Geometric discrepancy: 0.267

The information below is about HL_5J7L_140

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_62934.1

Basepair signature

cWW-tSH-F

Number of instances in this motif group

2

Unit IDs

9E0P|1|A|C|224
9E0P|1|A|A|225
9E0P|1|A|A|226
9E0P|1|A|A|227
9E0P|1|A|A|228
9E0P|1|A|U|229
9E0P|1|A|G|230

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

Large ribosomal subunit protein uL15