HL_9E0P_029
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0P_029 not in the Motif Atlas
- Geometric match to HL_5D8H_002
- Geometric discrepancy: 0.1975
- The information below is about HL_5D8H_002
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9E0P|1|A|C|1210
9E0P|1|A|G|1211
9E0P|1|A|U|1212
9E0P|1|A|A|1213
9E0P|1|A|A|1214
9E0P|1|A|U|1215
9E0P|1|A|A|1216
9E0P|1|A|G|1217
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 7
- 50S ribosomal protein L36
- Chain G
- Large ribosomal subunit protein uL6
- Chain I
- Large ribosomal subunit protein uL10
- Chain J
- Large ribosomal subunit protein uL11
Coloring options: