HL_9E0P_044
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- UUUACUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 9E0P|1|A|U|1996, 9E0P|1|A|A|1997, 9E0P|1|A|C|1998, 9E0P|1|A|U|1999, 9E0P|1|A|A|2000, 9E0P|1|A|A|2003
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0P_044 not in the Motif Atlas
- Geometric match to HL_4WF9_043
- Geometric discrepancy: 0.261
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 10
Unit IDs
9E0P|1|A|U|1994
9E0P|1|A|U|1995
9E0P|1|A|U|1996
9E0P|1|A|A|1997
9E0P|1|A|C|1998
9E0P|1|A|U|1999
9E0P|1|A|A|2000
9E0P|1|A|A|2001
9E0P|1|A|A|2002
9E0P|1|A|A|2003
9E0P|1|A|A|2004
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 5
- Large ribosomal subunit protein bL34
- Chain C
- Large ribosomal subunit protein uL2
Coloring options: